BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E11LP1|AL425143
(1022 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 1999 0.0
3x_Contig1557 137 5e-32
3x_Contig1518 129 1e-29
3x_Contig1663 127 4e-29
3x_Contig1374 127 4e-29
3x_Contig1446 125 2e-28
3x_Contig1521 121 3e-27
>3x_Contig1428
Length = 9146
Score = 1999 bits (1008), Expect = 0.0
Identities = 1017/1020 (99%)
Strand = Plus / Minus
Query: 1 ggattctgtacatggaaatgatcccgagcgtagtgctgattttggtcatttcaaatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7333 ggattctgtacatggaaatgatcccgagcgtagtgctgattttggtcatttcaaatccct 7274
Query: 61 gacatatagtagtagactcgaggaaggggagatgtataatgtttctgaggagagagtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7273 gacatatagtagtagactcgaggaaggggagatgtataatgtttctgaggagagagtcat 7214
Query: 121 gacgtataaagaaatttggcaaaccattgacccaataagatcttcaacagatcatctagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7213 gacgtataaagaaatttggcaaaccattgacccaataagatcttcaacagatcatctagt 7154
Query: 181 acccgtagagtctgatatatatgatggatctagtgtcacgtctattgtctgggagctgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7153 acccgtagagtctgatatatatgatggatctagtgtcacgtctattgtctgggagctgtc 7094
Query: 241 ggacgacgccaagaataatgcacgcgggagattgatcagtataggaaaagttagtcaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7093 ggacgacgccaagaataatgcacgcgggagattgatcagtataggaaaagttagtcaagg 7034
Query: 301 aattgtggaatataacggattgtttcagtgcattagaacgtggaataactcagtggtata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7033 aattgtggaatataacggattgtttcagtgcattagaacgtggaataactcagtggtata 6974
Query: 361 ccaatacggttctcatgtggaagaaatttttgggcagtttatgaagggattgagcactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6973 ccaatacggttctcatgtggaagaaatttttgggcagtttatgaagggattgagcactca 6914
Query: 421 caattcccaatttccatggcaaagaacatatccttagactacctgctttgacaacttcgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6913 caattcccaatttccatggcaaagaacatatccttagactacctgctttgacaacttcgc 6854
Query: 481 aagcgcaaaaaagattgtttccaaacaatcataaattaattgccttgctctgtaccatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6853 aagcgcaaaaaagattgtttccaaacaatcataaattaattgccttgctctgtaccatgg 6794
Query: 541 tagcgatttgaatttattgtcttttaactaatgaagtgtatcaatatatgtaacgtcccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6793 tagcgatttgaatttattgtcttttaactaatgaagtgtatcaatatatgtaacgtcccc 6734
Query: 601 caaggtaaactatttaggaagatctttagtcagttgataattacgattcacgctttcgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6733 caaggtaaactatttaggaagatctttagtcagttgataattacgattcacgctttcgat 6674
Query: 661 tcacgctttagatctgagggacattttcctcaacaggaaagggcataccccttacgaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6673 tcacgctttagatctgagggacattttcctcaacaggaaagggcataccccttacgaaaa 6614
Query: 721 tacattgtcaaatacctatggaaccatatgagtaattgaggttccctatcaaagctggat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6613 tacattgtcaaatacctatggaaccatatgagtaattgaggttccctatcaaagctggat 6554
Query: 781 tgccatatgtacaaattaaccatgacaccggaatgggcctgtgacagcattctccgaact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6553 tgccatatgtacaaattaaccatgacaccggaatgggcctgtgacagcattctccgaact 6494
Query: 841 tatacgagttatgtgacttgctcagtatatcaattattatccgatatagtgtacggccta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 6493 tatacgagttatgtgacttgctcagtatatcaattattatccgatatagtgtaacggcta 6434
Query: 901 tcacatcacgctttcaccgtggagaccggggttcgactccccgtatcggagtatcttttt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6433 tcacatcacgctttcaccgtggagaccggggttcgactccccgtatcggagtatcttttt 6374
Query: 961 atttgaagcctatctacttagtagatgaacgaccgtgtgataaacttgtttcgaccggaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6373 atttgaagcctatctacttagtagatgaacgaccgtgtgataaacttgtttcgaccggaa 6314
>3x_Contig1557
Length = 10562
Score = 137 bits (69), Expect = 5e-32
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 876 attatccgatatagtgtacggcctatcacatcacgctttcaccgtggagaccggggttcg 935
|||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 2538 attatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcg 2597
Query: 936 actccccgtatcggagtatcttttt 960
||||||||||||||||||| |||||
Sbjct: 2598 actccccgtatcggagtattttttt 2622
>3x_Contig1518
Length = 11021
Score = 129 bits (65), Expect = 1e-29
Identities = 74/77 (96%)
Strand = Plus / Minus
Query: 878 tatccgatatagtgtacggcctatcacatcacgctttcaccgtggagaccggggttcgac 937
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5819 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 5760
Query: 938 tccccgtatcggagtat 954
|||||||||||||||||
Sbjct: 5759 tccccgtatcggagtat 5743
>3x_Contig1663
Length = 13533
Score = 127 bits (64), Expect = 4e-29
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 879 atccgatatagtgtacggcctatcacatcacgctttcaccgtggagaccggggttcgact 938
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 915
Query: 939 ccccgtatcggagtat 954
||||||||||||||||
Sbjct: 916 ccccgtatcggagtat 931
>3x_Contig1374
Length = 8985
Score = 127 bits (64), Expect = 4e-29
Identities = 83/88 (94%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 878 tatccgatatagtgtacggcctatcacatcacgctttcaccgtggagaccggggttcgac 937
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 8892 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 8833
Query: 938 tccccgtatcggag-tatctttttattt 964
|||||||||||||| | |||||||||||
Sbjct: 8832 tccccgtatcggagttttctttttattt 8805
>3x_Contig1446
Length = 10598
Score = 125 bits (63), Expect = 2e-28
Identities = 72/75 (96%)
Strand = Plus / Minus
Query: 878 tatccgatatagtgtacggcctatcacatcacgctttcaccgtggagaccggggttcgac 937
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3306 tatccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgac 3247
Query: 938 tccccgtatcggagt 952
|||||||||||||||
Sbjct: 3246 tccccgtatcggagt 3232
>3x_Contig1521
Length = 8057
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 880 tccgatatagtgtacggcctatcacatcacgctttcaccgtggagaccggggttcgactc 939
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 4237
Query: 940 cccgtatcggagt 952
|||||||||||||
Sbjct: 4236 cccgtatcggagt 4224
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6280
Number of Sequences: 1807
Number of extensions: 6280
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 7
length of query: 1022
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1006
effective length of database: 10,329,639
effective search space: 10391616834
effective search space used: 10391616834
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)